STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fis1Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering. (154 aa)    
Predicted Functional Partners:
tbc1d15
TBC1 domain family, member 15.
    
 0.952
tbc1d17
TBC1 domain family, member 17.
    
 0.930
gdap1
Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily.
    
 0.795
pex19
Peroxisomal biogenesis factor 19.
    
 0.794
ENSOMEP00000002244
Myxovirus (influenza) resistance B; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.776
ENSOMEP00000025147
Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.776
LOC112163170
Occludin a.
    
 0.771
LOC112152918
Peroxisomal biogenesis factor 11 alpha.
    
 0.769
ENSOMEP00000007530
Peroxisomal biogenesis factor 11 beta.
    
 0.769
pex3
Peroxisomal biogenesis factor 3.
     
 0.757
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.