STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000012836C2 domain-containing protein. (147 aa)    
Predicted Functional Partners:
ENSOMEP00000010591
Uncharacterized protein.
    
  0.681
ENSOMEP00000021778
Uncharacterized protein.
    
  0.681
LOC112146979
Uncharacterized protein.
  
  
 
0.668
LOC112141416
Uncharacterized protein.
  
  
 
0.663
ENSOMEP00000020815
TROVE domain-containing protein.
    
  0.572
ENSOMEP00000013047
C1q domain-containing protein.
   
  0.543
setdb1
SET domain bifurcated histone lysine methyltransferase 1b.
    
  0.511
ENSOMEP00000020966
Ribosomal protein S27a.
    
  0.481
ENSOMEP00000001910
Melanocyte-stimulating hormone receptor; Receptor for MSH (alpha, beta and gamma) and ACTH. The activity of this receptor is mediated by G proteins which activate adenylate cyclase; Belongs to the G-protein coupled receptor 1 family.
    
  0.475
ENSOMEP00000002833
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.467
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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