STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000013024Ataxin 10. (492 aa)    
Predicted Functional Partners:
iqcb1
IQ motif containing B1.
    
 
 0.562
nphp4
Uncharacterized protein.
      
 0.507
cdpf1
Cysteine rich DPF motif domain containing 1.
      
 0.502
cunh19orf54
Zgc:153119.
      
 0.497
ENSOMEP00000018381
Ataxin 2.
   
  
 0.492
ENSOMEP00000019604
Uncharacterized protein.
      
 0.463
ENSOMEP00000020069
Uncharacterized protein.
      
 0.463
ENSOMEP00000022157
Uncharacterized protein.
      
 0.463
ENSOMEP00000000533
Proteasome activator subunit 4a.
      
 0.457
abce1
ATP-binding cassette, sub-family E (OABP), member 1.
    
   0.441
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.