STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112156455Matrix metallopeptidase 14a (membrane-inserted). (557 aa)    
Predicted Functional Partners:
mmp2
Matrix metallopeptidase 2.
   
0.913
LOC112147164
Matrix metallopeptidase 14b (membrane-inserted).
  
  
 
0.896
LOC112146029
TIMP metallopeptidase inhibitor 2b.
   
 0.816
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.783
ENSOMEP00000001754
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 
  0.766
mmp15
Matrix metallopeptidase 15b.
  
  
 
0.756
TIMP2
TIMP metallopeptidase inhibitor 2.
   
 0.751
MMP1
Matrix metallopeptidase 1.
  
0.735
LOC112149602
Matrix metallopeptidase 20a (enamelysin).
  
0.733
LOC112149560
Matrix metallopeptidase 13b.
  
0.733
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.