STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000017649Si:dkey-66i24.7. (189 aa)    
Predicted Functional Partners:
LOC112157345
Si:ch211-113e8.11.
  
     0.475
ENSOMEP00000020887
Si:dkey-206p8.1.
  
     0.469
ENSOMEP00000006287
Si:ch211-252f13.5.
  
     0.450
ENSOMEP00000027295
Si:cabz01080528.1.
  
    0.441
ENSOMEP00000034381
G_PROTEIN_RECEP_F1_2 domain-containing protein.
  
     0.421
ENSOMEP00000011584
Pericentrin.
  
     0.403
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.