STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112153066Rhodanese domain-containing protein. (122 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
  
 
 0.949
sod2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.920
ybey
YbeY metalloendoribonuclease.
   
   0.872
dap3
Death associated protein 3.
   
   0.870
rps11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
   0.848
ENSOMEP00000004433
Uncharacterized protein.
    
 0.847
nfs1
NFS1 cysteine desulfurase.
   
 0.830
ENSOMEP00000029968
Selenocysteine lyase.
   
 0.830
MRPL21
Mitochondrial ribosomal protein L21.
  
 
 0.818
ENSOMEP00000033413
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
   0.816
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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