STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112136115Ciliary neurotrophic factor receptor. (360 aa)    
Predicted Functional Partners:
LOC112144143
Uncharacterized protein.
    
 0.933
LOC112148476
LIF receptor subunit alpha a.
    
 0.933
LOC112146293
Interleukin 12 receptor, beta 2a, like.
   
 0.908
il6st
Uncharacterized protein.
   
0.908
ENSOMEP00000022770
IL-6 subfamily cytokine M17.
     
 0.896
LOC112142567
Uncharacterized protein.
   
 0.884
csf3r
Colony stimulating factor 3 receptor (granulocyte).
   
 0.845
LOC112150134
Uncharacterized protein.
   
0.751
ENSOMEP00000001442
Interleukin 12 receptor, beta 2a.
   
 0.751
LOC112143724
Interleukin 11a.
     
 0.736
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.