STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000018754Dynein_attach_N domain-containing protein. (131 aa)    
Predicted Functional Partners:
ccdc65
NYD-SP28 domain-containing protein.
   
 
 0.671
drc1
Uncharacterized protein.
   
 
 0.654
SLC66A2
Solute carrier family 66 member 2.
    
 
 0.649
ENSOMEP00000032903
Dynein, axonemal, assembly factor 3 like.
   
  
 0.600
lrrc6
Leucine rich repeat containing 6.
      
 0.597
ENSOMEP00000006028
MON2 homolog, regulator of endosome-to-Golgi trafficking.
   
 
 0.592
ENSOMEP00000024927
Mon2_C domain-containing protein.
   
 
 0.592
atp10a
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
 0.574
atp8b1
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
 0.574
ENSOMEP00000005207
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
 0.574
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.