STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000020228Uncharacterized protein. (140 aa)    
Predicted Functional Partners:
ENSOMEP00000018071
Uncharacterized protein.
 
     0.939
ephx2
Epoxide hydrolase 2, cytoplasmic.
   
 
 0.814
ENSOMEP00000011628
Phospholipase A2, group XV.
    
 0.808
ENSOMEP00000026475
Uncharacterized protein.
    
 0.808
lcat
Lecithin-cholesterol acyltransferase.
    
 0.808
DGAT1
O-acyltransferase.
    
 0.776
ENSOMEP00000017085
Uncharacterized protein.
    
 0.776
LOC112143225
O-acyltransferase.
    
 0.776
soat1
O-acyltransferase.
    
 0.776
ENSOMEP00000006185
Hydrolase_4 domain-containing protein.
    
 0.665
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.