STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000020500Arrestin_C domain-containing protein. (403 aa)    
Predicted Functional Partners:
LOC112155709
Thioredoxin; Belongs to the thioredoxin family.
    
 0.975
LOC112139640
Thioredoxin 2.
    
 0.938
ENSOMEP00000006534
Thioredoxin domain-containing protein.
    
 0.920
LOC112156198
Thioredoxin; Belongs to the thioredoxin family.
    
 0.920
LOC112139894
NACHT domain-containing protein.
    
 0.888
txnip
Thioredoxin interacting protein.
  
  
 
0.871
ENSOMEP00000012874
E3 ubiquitin-protein ligase.
    
 
 0.864
LOC112144968
E3 ubiquitin-protein ligase.
    
 
 0.864
ENSOMEP00000014812
Thioredoxin domain-containing protein.
    
 0.819
ENSOMEP00000011943
Protein tyrosine phosphatase non-receptor type 6.
    
   0.702
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.