STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112136885Endothelin 1. (202 aa)    
Predicted Functional Partners:
ednra
Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family.
    
 0.991
LOC112156013
Endothelin receptor type Ab; Belongs to the G-protein coupled receptor 1 family.
    
 0.989
LOC112154771
Endothelin receptor type Bb; Belongs to the G-protein coupled receptor 1 family.
    
 0.984
LOC112153752
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
    
 0.984
LOC112147829
Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family.
    
 0.984
LOC112159078
Uncharacterized protein.
  
  
0.886
ghsr
Growth hormone secretagogue receptor b; Belongs to the G-protein coupled receptor 1 family.
    
 0.863
ENSOMEP00000027818
Uncharacterized protein.
  
  
 
0.862
LOC112153026
Angiotensin II receptor, type 2; Belongs to the G-protein coupled receptor 1 family.
    
 0.855
htr1f
5-hydroxytryptamine (serotonin) receptor 1Fb.
    
 0.837
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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