STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mapre3Microtubule-associated protein, RP/EB family, member 3b. (259 aa)    
Predicted Functional Partners:
ENSOMEP00000032189
Cytoskeleton associated protein 5.
   
 
 0.900
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.869
bub3
BUB3 mitotic checkpoint protein.
   
 0.832
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
  
 
  
0.776
bub1b
BUB1 mitotic checkpoint serine/threonine kinase Bb.
   
 0.761
LOC112157610
Uncharacterized protein.
   
 0.761
aurka
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.743
ENSOMEP00000031347
Aurora kinase B; Belongs to the protein kinase superfamily.
   
 0.743
bub1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 0.718
trdmt1
tRNA aspartic acid methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
     
 0.673
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.