STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112145800Progesterone receptor membrane component 2; Belongs to the cytochrome b5 family. (198 aa)    
Predicted Functional Partners:
bcap31
B cell receptor associated protein 31.
   
 0.677
bcap29
Uncharacterized protein.
   
 0.677
ENSOMEP00000006022
Lectin, mannose-binding, 1.
    
  0.640
stx5
Syntaxin 5A; Belongs to the syntaxin family.
    
  0.638
ENSOMEP00000011553
Uncharacterized protein.
   
 0.628
ENSOMEP00000027465
Ankyrin repeat and FYVE domain containing 1.
    
  0.628
lbr
Lamin B receptor.
    
 0.619
tm7sf2
Transmembrane 7 superfamily member 2.
    
 0.619
mospd2
Motile sperm domain containing 2.
   
 
  0.610
vapa
VAMP (vesicle-associated membrane protein)-associated protein A, like.
   
  0.594
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.