STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gtpbp10GTP-binding protein 10 (putative). (367 aa)    
Predicted Functional Partners:
mrpl20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.965
ENSOMEP00000032804
Mitochondrial ribosomal protein L27.
  
 
 0.961
malsu1
Si:zfos-1192g2.3.
  
 
 0.955
MRPL21
Mitochondrial ribosomal protein L21.
  
 
 0.948
mrpl11
Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.944
mrpl32
Mitochondrial ribosomal protein L32.
  
 
 0.942
ENSOMEP00000033413
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.942
mrpl58
Mitochondrial ribosomal protein L58.
  
 
 0.929
mrpl9
Mitochondrial ribosomal protein L9.
   
 
 0.923
ENSOMEP00000002380
Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.918
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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