STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112142791Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (700 aa)    
Predicted Functional Partners:
slc9a7
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
  
  
 
0.905
slc9a6
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
  
  
 
0.905
ENSOMEP00000013823
Sodium/potassium-transporting ATPase subunit alpha.
   
 
 0.627
ENSOMEP00000036174
Sodium/potassium-transporting ATPase subunit alpha.
   
 
 0.582
SLC8B1
Solute carrier family 8 member B1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
 
 0.573
LOC112156657
Sodium/potassium-transporting ATPase subunit alpha.
   
 
 0.569
tmco3
Transmembrane and coiled-coil domains 3.
   
 
 0.525
ENSOMEP00000007550
Cation/H+ exchanger protein 1.
   
 
 0.475
ENSOMEP00000009094
Cation/H+ exchanger protein 2; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
 
 0.475
psmc1
Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.
    
  0.470
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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