STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112153195Neuroligin 3a. (851 aa)    
Predicted Functional Partners:
LOC112154281
Neurexin 1.
    
 0.958
nrxn1
Neurexin 1.
    
 0.958
ENSOMEP00000033301
Uncharacterized protein.
    
 0.956
ENSOMEP00000019519
Neurexin 3b.
    
 0.865
ENSOMEP00000003011
Neurexin 2b.
    
 0.828
ENSOMEP00000003045
Uncharacterized protein.
    
 0.828
LOC112139758
Uncharacterized protein.
    
 0.828
ENSOMEP00000004843
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
 0.744
ENSOMEP00000035991
UTP20 small subunit processome component.
   
 0.733
MDGA2
MAM domain containing glycosylphosphatidylinositol anchor 2.
   
 
 0.727
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.