Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSOMEP00000025248 | LOC112137054 | ENSOMEP00000025248 | ENSOMEP00000008511 | Glypican 6b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Heparan sulfate 2-O-sulfotransferase 1b. | 0.647 |
ENSOMEP00000025248 | LOC112143254 | ENSOMEP00000025248 | ENSOMEP00000010529 | Glypican 6b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.622 |
ENSOMEP00000025248 | LOC112145552 | ENSOMEP00000025248 | ENSOMEP00000023458 | Glypican 6b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.737 |
ENSOMEP00000025248 | LOC112162615 | ENSOMEP00000025248 | ENSOMEP00000025524 | Glypican 6b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.853 |
ENSOMEP00000025248 | SDC3 | ENSOMEP00000025248 | ENSOMEP00000027039 | Glypican 6b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.535 |
ENSOMEP00000025248 | glce | ENSOMEP00000025248 | ENSOMEP00000007121 | Glypican 6b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Glucuronic acid epimerase b. | 0.474 |
ENSOMEP00000025248 | hs2st1 | ENSOMEP00000025248 | ENSOMEP00000026786 | Glypican 6b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Heparan sulfate 2-O-sulfotransferase 1a. | 0.647 |
LOC112137054 | ENSOMEP00000025248 | ENSOMEP00000008511 | ENSOMEP00000025248 | Heparan sulfate 2-O-sulfotransferase 1b. | Glypican 6b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.647 |
LOC112137054 | LOC112143254 | ENSOMEP00000008511 | ENSOMEP00000010529 | Heparan sulfate 2-O-sulfotransferase 1b. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.596 |
LOC112137054 | LOC112145552 | ENSOMEP00000008511 | ENSOMEP00000023458 | Heparan sulfate 2-O-sulfotransferase 1b. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.596 |
LOC112137054 | LOC112153059 | ENSOMEP00000008511 | ENSOMEP00000014296 | Heparan sulfate 2-O-sulfotransferase 1b. | Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.647 |
LOC112137054 | LOC112161127 | ENSOMEP00000008511 | ENSOMEP00000015435 | Heparan sulfate 2-O-sulfotransferase 1b. | Glypican 6a; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.647 |
LOC112137054 | LOC112162615 | ENSOMEP00000008511 | ENSOMEP00000025524 | Heparan sulfate 2-O-sulfotransferase 1b. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.740 |
LOC112137054 | SDC3 | ENSOMEP00000008511 | ENSOMEP00000027039 | Heparan sulfate 2-O-sulfotransferase 1b. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.625 |
LOC112137054 | glce | ENSOMEP00000008511 | ENSOMEP00000007121 | Heparan sulfate 2-O-sulfotransferase 1b. | Glucuronic acid epimerase b. | 0.586 |
LOC112137054 | gpc2 | ENSOMEP00000008511 | ENSOMEP00000011112 | Heparan sulfate 2-O-sulfotransferase 1b. | Glypican 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.647 |
LOC112137054 | hs2st1 | ENSOMEP00000008511 | ENSOMEP00000026786 | Heparan sulfate 2-O-sulfotransferase 1b. | Heparan sulfate 2-O-sulfotransferase 1a. | 0.899 |
LOC112143254 | ENSOMEP00000025248 | ENSOMEP00000010529 | ENSOMEP00000025248 | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | Glypican 6b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.622 |
LOC112143254 | LOC112137054 | ENSOMEP00000010529 | ENSOMEP00000008511 | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | Heparan sulfate 2-O-sulfotransferase 1b. | 0.596 |
LOC112143254 | LOC112145552 | ENSOMEP00000010529 | ENSOMEP00000023458 | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.772 |
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