STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112163225Zgc:73226. (247 aa)    
Predicted Functional Partners:
bcl2
BCL2 apoptosis regulator b.
    
 0.972
ENSOMEP00000033490
GABA(A) receptor-associated protein like 2.
   
 0.967
gabarap
GABA(A) receptor-associated protein b.
   
 0.939
LOC112144934
Uncharacterized protein.
    
 0.938
bcl2l1
BCL2 like 1.
    
 0.937
LOC112144822
Ras homolog, mTORC1 binding like 1.
    
 0.923
LOC112143733
Zgc:92606.
   
 0.921
ENSOMEP00000000423
Uncharacterized protein.
    
 0.914
ENSOMEP00000012310
Ras homolog, mTORC1 binding.
    
 0.914
bnip3
BCL2 interacting protein 3.
  
  
 
0.895
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.