STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000028065Cnn_1N domain-containing protein. (378 aa)    
Predicted Functional Partners:
ENSOMEP00000008638
Tcp10_C domain-containing protein.
    
 
 0.843
ENSOMEP00000027376
Uncharacterized protein.
    
 
 0.843
plk4
Polo-like kinase 4 (Drosophila).
   
 0.765
ENSOMEP00000032189
Cytoskeleton associated protein 5.
    
 
 0.706
tubg1
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 
 0.704
PLK1
Serine/threonine-protein kinase PLK.
   
 0.676
plk3
Serine/threonine-protein kinase PLK.
   
 0.676
ENSOMEP00000035521
Serine/threonine-protein kinase PLK.
   
 0.676
ENSOMEP00000009869
Centrosomal protein 135.
    
 
 0.651
espl1
Extra spindle pole bodies like 1, separase.
   
 0.647
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.