STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000030380Uncharacterized protein. (230 aa)    
Predicted Functional Partners:
ENSOMEP00000010591
Uncharacterized protein.
   
  0.623
ENSOMEP00000021778
Uncharacterized protein.
   
  0.623
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.568
slf1
SMC5-SMC6 complex localization factor 1.
   
 0.565
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.561
ENSOMEP00000018267
Tudor-knot domain-containing protein.
    
 0.554
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.554
ENSOMEP00000033797
Tudor domain-containing protein.
    
 0.554
ripk4
Receptor-interacting serine-threonine kinase 4.
   
  0.546
ENSOMEP00000033331
Uncharacterized protein.
   
 0.544
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.