STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112146292Importin N-terminal domain-containing protein. (889 aa)    
Predicted Functional Partners:
adgrd1
Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family.
   
 0.878
ran
GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.878
nup98
Nucleoporin 98.
   
 0.838
ENSOMEP00000016934
Zinc finger CCCH-type containing 14.
    
 
 0.788
ENSOMEP00000016942
Uncharacterized protein.
    
 
 0.788
ipo4
Importin 4.
   
 
0.774
ipo5
Karyopherin (importin) beta 3.
   
 
0.770
ENSOMEP00000011752
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.756
LOC112149479
TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 
 0.751
bap1
Ubiquitin carboxyl-terminal hydrolase.
    
   0.716
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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