STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ints6Integrator complex subunit 6. (872 aa)    
Predicted Functional Partners:
ints1
Integrator complex subunit 1.
    
 0.949
ints3
Integrator complex subunit 3.
    
 0.949
ints8
Integrator complex subunit 8.
   
 0.949
ints13
Integrator complex subunit 13.
    
 0.946
ints5
Integrator complex subunit 5.
    
 0.946
ints4
Integrator complex subunit 4.
    
 0.946
ints11
Integrator complex subunit 11.
   
 0.943
ints9
Integrator complex subunit 9.
    
 0.942
ENSOMEP00000032025
Integrator complex subunit 2.
    
 0.942
ints10
Integrator complex subunit 10.
   
 0.941
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.