STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dus2Dihydrouridine synthase 2. (501 aa)    
Predicted Functional Partners:
eprs1
Glutamyl-prolyl-tRNA synthetase.
  
 
 0.994
brix1
Brix domain containing 2.
   
    0.798
thumpd1
THUMP domain containing 1.
  
 
 0.776
gnl2
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
    0.762
dus1l
Dihydrouridine synthase 1-like (S. cerevisiae).
   
  
0.749
utp3
UTP3 small subunit processome component.
   
    0.746
bud23
BUD23 rRNA methyltransferase and ribosome maturation factor.
  
    0.743
pus3
Pseudouridylate synthase 3.
  
 
 0.713
ENSOMEP00000035220
Large 60S subunit nuclear export GTPase 1.
   
    0.699
ENSOMEP00000014752
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
 
 0.676
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.