STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000034922Uncharacterized protein. (555 aa)    
Predicted Functional Partners:
ENSOMEP00000010591
Uncharacterized protein.
   
  0.622
ENSOMEP00000021778
Uncharacterized protein.
   
  0.622
bard1
BRCA1 associated RING domain 1.
    
  0.567
ENSOMEP00000026519
Uncharacterized protein.
    
  0.539
ENSOMEP00000026529
Uncharacterized protein.
    
  0.539
LOC112155459
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.530
ENSOMEP00000007480
PX domain-containing protein.
    
  0.510
ENSOMEP00000007491
Serum/glucocorticoid regulated kinase family member 3.
    
  0.510
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
   
  0.508
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
  0.508
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
Server load: low (26%) [HD]