STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000035847Synapsin domain-containing protein. (284 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.751
ENSOMEP00000008289
C2 domain-containing protein.
     
 0.751
ENSOMEP00000008322
Uncharacterized protein.
     
 0.751
LOC112159975
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.709
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.709
ENSOMEP00000017526
Synapsin_C domain-containing protein.
 
      0.661
rab3a
RAB3A, member RAS oncogene family, b.
   
 0.559
LOC112144440
Uncharacterized protein.
   
 0.559
LOC112137006
RAB3B, member RAS oncogene family.
   
 0.559
LOC112146325
RAB3D, member RAS oncogene family, b.
   
 0.559
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.