Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IW16_04010AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)    
Predicted Functional Partners:
IW16_04005
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.798
IW16_04000
DNA mismatch repair protein MutL; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.794
IW16_04015
Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.667
IW16_00575
Helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.642
IW16_16920
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.575
IW16_04020
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.545
IW16_13900
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.545
IW16_12045
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.539
IW16_04540
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.529
IW16_09445
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.520
Your Current Organism:
Chryseobacterium vrystaatense
NCBI taxonomy Id: 307480
Other names: C. vrystaatense, CCUG 50970, Chryseobacterium sp. R-23533, Chryseobacterium sp. R-23566, Chryseobacterium vrystaatense de Beer et al. 2005 emend. Montero-Calasanz et al. 2014, LMG 22846, LMG:22846
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.