STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IW16_09395Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (772 aa)    
Predicted Functional Partners:
IW16_11860
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.982
IW16_11950
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.976
IW16_11945
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.945
IW16_09410
Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.792
IW16_09405
Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.783
IW16_17090
leucyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.762
guaA
GMP synthase; Contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.723
IW16_21495
3,4-dihydroxy-2-butanone 4-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.722
IW16_03775
Metallophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.583
IW16_02140
Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.567
Your Current Organism:
Chryseobacterium vrystaatense
NCBI taxonomy Id: 307480
Other names: C. vrystaatense, CCUG 50970, Chryseobacterium sp. R-23533, Chryseobacterium sp. R-23566, Chryseobacterium vrystaatense de Beer et al. 2005 emend. Montero-Calasanz et al. 2014, LMG 22846, LMG:22846
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.