Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IW16_11040DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (452 aa)    
Predicted Functional Partners:
IW16_15980
DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.904
IW16_12850
RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.902
IW16_25680
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.901
IW16_05995
Polynucleotide phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.793
IW16_02760
Thioester reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.683
IW16_01000
50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.680
IW16_00995
50S ribosomal protein L4; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.679
IW16_10800
Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.654
IW16_16755
50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.609
IW16_11045
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.596
Your Current Organism:
Chryseobacterium vrystaatense
NCBI taxonomy Id: 307480
Other names: C. vrystaatense, CCUG 50970, Chryseobacterium sp. R-23533, Chryseobacterium sp. R-23566, Chryseobacterium vrystaatense de Beer et al. 2005 emend. Montero-Calasanz et al. 2014, LMG 22846, LMG:22846
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.