Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
IW16_17840Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. (123 aa)    
Predicted Functional Partners:
IW16_04460
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.810
IW16_21555
Metallo-beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.809
IW16_13510
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.807
IW16_15035
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.807
IW16_08910
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.786
IW16_17845
Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.762
IW16_17850
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.761
IW16_10525
Tryptophan synthase subunit beta; Catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.720
IW16_05680
Serine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.704
IW16_10520
Tryptophan synthase alpha chain; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.704
Your Current Organism:
Chryseobacterium vrystaatense
NCBI taxonomy Id: 307480
Other names: C. vrystaatense, CCUG 50970, Chryseobacterium sp. R-23533, Chryseobacterium sp. R-23566, Chryseobacterium vrystaatense de Beer et al. 2005 emend. Montero-Calasanz et al. 2014, LMG 22846, LMG:22846
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