STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ttaiw_02499Unannotated protein. (263 aa)    
Predicted Functional Partners:
eptA
Unannotated protein.
 
   
 0.825
qseC_4
Unannotated protein.
       0.571
basR
Unannotated protein.
       0.559
Ttaiw_00341
Unannotated protein.
  
     0.423
Ttaiw_01698
Unannotated protein.
  
     0.417
Ttaiw_01992
Unannotated protein.
  
     0.400
Your Current Organism:
Tepidimonas taiwanensis
NCBI taxonomy Id: 307486
Other names: BCRC 17406, LMG 22826, LMG:22826, T. taiwanensis, Tepidimonas sp. I1-1, Tepidimonas taiwanensis Chen et al. 2006, strain I1-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.