Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
gppA | phoR | GCA_000807215_01721 | GCA_000807215_01728 | Unannotated protein. | Unannotated protein. | 0.472 |
gppA | phoU | GCA_000807215_01721 | GCA_000807215_01726 | Unannotated protein. | Unannotated protein; Plays a role in the regulation of phosphate uptake. | 0.549 |
gppA | pstA | GCA_000807215_01721 | GCA_000807215_01723 | Unannotated protein. | Unannotated protein. | 0.717 |
gppA | pstB | GCA_000807215_01721 | GCA_000807215_01722 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.696 |
gppA | pstC1 | GCA_000807215_01721 | GCA_000807215_01724 | Unannotated protein. | Unannotated protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.657 |
gppA | pstS | GCA_000807215_01721 | GCA_000807215_01725 | Unannotated protein. | Unannotated protein. | 0.577 |
guaA_1 | mltD | GCA_000807215_01758 | GCA_000807215_00576 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein. | 0.805 |
guaA_1 | pstA | GCA_000807215_01758 | GCA_000807215_01723 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein. | 0.546 |
guaA_1 | pstB | GCA_000807215_01758 | GCA_000807215_01722 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.577 |
guaA_1 | pstS | GCA_000807215_01758 | GCA_000807215_01725 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein. | 0.620 |
mltD | guaA_1 | GCA_000807215_00576 | GCA_000807215_01758 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.805 |
mltD | pstS | GCA_000807215_00576 | GCA_000807215_01725 | Unannotated protein. | Unannotated protein. | 0.581 |
phoR | gppA | GCA_000807215_01728 | GCA_000807215_01721 | Unannotated protein. | Unannotated protein. | 0.472 |
phoR | phoU | GCA_000807215_01728 | GCA_000807215_01726 | Unannotated protein. | Unannotated protein; Plays a role in the regulation of phosphate uptake. | 0.885 |
phoR | pstA | GCA_000807215_01728 | GCA_000807215_01723 | Unannotated protein. | Unannotated protein. | 0.589 |
phoR | pstB | GCA_000807215_01728 | GCA_000807215_01722 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.589 |
phoR | pstC1 | GCA_000807215_01728 | GCA_000807215_01724 | Unannotated protein. | Unannotated protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.574 |
phoR | pstS | GCA_000807215_01728 | GCA_000807215_01725 | Unannotated protein. | Unannotated protein. | 0.671 |
phoU | gppA | GCA_000807215_01726 | GCA_000807215_01721 | Unannotated protein; Plays a role in the regulation of phosphate uptake. | Unannotated protein. | 0.549 |
phoU | phoR | GCA_000807215_01726 | GCA_000807215_01728 | Unannotated protein; Plays a role in the regulation of phosphate uptake. | Unannotated protein. | 0.885 |
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