STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F751_0181Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (100 aa)    
Predicted Functional Partners:
F751_6249
Chromatin structure-remodeling complex subunit snf21.
    
 0.975
F751_5399
Histone acetyltransferase type B catalytic subunit.
    
 0.868
F751_4269
Histone H2A deubiquitinase MYSM1.
    
 0.866
F751_2642
Ubiquitin-60S ribosomal protein L40-2.
    
 0.847
F751_5642
Histone acetyltransferase GCN5.
    
 0.828
F751_6159
Histone H2B; Belongs to the histone H2B family.
 
 0.810
F751_1765
Histone H2B; Belongs to the histone H2B family.
 
 0.810
F751_4959
Histone H2B; Belongs to the histone H2B family.
 
 0.805
F751_0685
Uncharacterized protein.
   
 0.776
F751_0286
Histone H2A; Belongs to the histone H2A family.
 
 
 0.776
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.