STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F751_1127Internalin-A. (262 aa)    
Predicted Functional Partners:
F751_2484
Small nuclear ribonucleoprotein Sm D2.
    
 0.485
F751_3334
40S ribosomal protein S27-2.
  
    0.477
F751_2630
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.475
F751_4135
Metallophos domain-containing protein.
   
 0.475
F751_5464
Serine/threonine-protein phosphatase.
   
 0.475
F751_5506
Metallophos domain-containing protein.
   
 0.475
F751_0718
Putative small nuclear ribonucleoprotein F.
    
  0.471
F751_5020
Small nuclear ribonucleoprotein-associated protein B.
    
 0.454
F751_4861
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
    
 0.453
F751_4533
Small nuclear ribonucleoprotein G.
    
  0.453
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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