STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F751_5051DNA polymerase iota. (1142 aa)    
Predicted Functional Partners:
F751_4343
DNA repair protein REV1.
  
0.893
F751_1889
DNA polymerase zeta processivity subunit.
   
 0.819
F751_6358
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.756
F751_4080
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.756
F751_2321
Ubiquitin-40S ribosomal protein S27a-1.
    
  0.716
F751_1873
DNA polymerase kappa.
  
 0.698
F751_1352
DNA polymerase zeta catalytic subunit.
   
 0.676
F751_1353
DNA polymerase zeta catalytic subunit.
   
 0.676
F751_2642
Ubiquitin-60S ribosomal protein L40-2.
    
  0.664
F751_2439
Bifunctional dihydrofolate reductase-thymidylate synthase.
     
 0.575
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.