STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F751_1971DNA-directed RNA polymerases I, II, and III subunit RPABC1. (188 aa)    
Predicted Functional Partners:
F751_3455
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
   
 0.999
F751_2861
DNA-directed RNA polymerases I and III subunit RPAC1.
  
 0.998
F751_3708
DNA-directed RNA polymerase subunit 10-like protein.
   
 0.998
F751_2644
Uncharacterized protein.
  
 0.997
F751_6084
DNA-directed RNA polymerases I, II, and III subunit RPABC3; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
   
 0.997
F751_2377
DNA-directed RNA polymerase II subunit RPB7.
   
 0.996
F751_1773
DNA-directed RNA polymerases II, IV and V subunit 3.
  
 0.996
F751_2236
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.996
F751_6078
DNA-directed RNA polymerase III subunit RPC10.
   
 0.996
F751_4350
Putative DNA-directed RNA polymerase I subunit RPA2.
  
 0.996
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.