STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F751_3652ABC transporter D family member 1. (1342 aa)    
Predicted Functional Partners:
F751_6541
Hydroxysteroid dehydrogenase-like protein 2.
   
 
 0.624
F751_2368
Peroxisome biogenesis protein 3-1.
   
 0.611
F751_2885
ABC transporter D family member 2.
  
0.580
F751_1072
LIMR family protein.
    
 0.574
F751_6532
Mitochondrial substrate carrier family protein Q; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.559
F751_0325
Peroxisomal membrane protein PEX16.
     
 0.539
F751_3680
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 
 0.533
F751_5964
Mitochondrial fission 1 protein.
     
 0.473
F751_2778
Uncharacterized protein.
  
     0.410
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.