Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
F751_4901Putative WD repeat-containing protein C17D11.16. (517 aa)    
Predicted Functional Partners:
F751_5865
Ribosome biogenesis protein brx1.
   
 
 0.991
F751_2016
Putative rRNA-processing protein EBP2-like protein.
   
 
 0.985
F751_2318
Ribosome production factor 2-like protein.
   
 
 0.977
F751_3491
Nucleolar complex protein 2-like protein.
   
 
 0.977
F751_4662
Glutamate-rich WD repeat-containing protein 1.
   
  
 0.944
F751_1086
Pescadillo-like protein.
   
 
 0.942
F751_4398
Ribosomal L1 domain-containing protein 1.
   
 
 0.932
F751_6042
WD repeat-containing protein 75.
   
 
 0.930
F751_6255
Bystin.
   
   0.930
F751_3683
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
  
 0.922
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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