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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F751_4904Phosphate acetyltransferase. (550 aa)    
Predicted Functional Partners:
F751_4905
Probable acetate kinase.
  
  
 0.884
F751_5569
116 kDa U5 small nuclear ribonucleoprotein component.
   
 0.813
F751_2023
Pre-mRNA-processing factor 6.
    
 0.808
F751_3367
Cell division cycle 5-like protein.
    
  0.757
F751_3359
Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family.
    
 0.692
F751_0067
Polyadenylate-binding protein 4.
   
 0.681
F751_6666
ATP synthase subunit alpha.
   
 
 0.669
F751_1369
ATP synthase subunit O, mitochondrial.
   
 
 0.655
F751_1086
Pescadillo-like protein.
   
  0.614
F751_3788
ATP synthase subunit delta', mitochondrial.
   
   0.603
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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