STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F751_4905Probable acetate kinase. (406 aa)    
Predicted Functional Partners:
F751_4904
Phosphate acetyltransferase.
  
  
 0.884
F751_2597
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.509
F751_4554
Erythronolide synthase, modules 1 and 2.
  
  
 0.488
F751_4316
Polyketide synthase PksN.
  
  
 0.488
F751_1144
UPF0047 protein YjbQ.
      0.479
F751_6666
ATP synthase subunit alpha.
   
   0.477
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.