Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F751_4911ALG-2 interacting protein X. (939 aa)    
Predicted Functional Partners:
F751_4434
Vacuolar protein sorting-associated protein 32-like protein 1.
   
 0.978
F751_4119
Vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.
   
 0.858
F751_4703
Vacuolar protein sorting-associated protein 2-like protein 1.
    
 0.792
F751_1062
AMSH-like ubiquitin thioesterase 1.
    
 
 0.791
F751_6593
Ras-related protein Rab7.
      
 0.767
F751_4785
Isopentenyl-diphosphate Delta-isomerase.
   
 0.745
F751_4581
Vacuolar protein sorting-associated protein 20-like protein 1.
    
 0.727
F751_6195
Vacuolar protein sorting-associated protein 36.
      
 0.726
F751_2224
Vacuolar protein sorting-associated protein 2-like protein 3.
    
 0.714
F751_0723
Chorein_N domain-containing protein.
   
 
 0.705
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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