Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
F751_2668Zeaxanthin epoxidase, chloroplastic. (617 aa)    
Predicted Functional Partners:
F751_1926
Violaxanthin de-epoxidase, chloroplastic.
     
 0.979
F751_1825
Beta-carotene hydroxylase; Belongs to the sterol desaturase family.
   
 
 0.964
F751_2331
Cytochrome P450 97B2, chloroplastic; Belongs to the cytochrome P450 family.
   
 0.963
F751_1786
Lycopene beta cyclase, chloroplastic.
   
  
 0.824
F751_3908
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
   
 
 0.812
F751_6063
Prolycopene isomerase, chloroplastic.
  
  
 0.803
F751_6574
Lycopene epsilon cyclase, chloroplastic.
      
 0.802
F751_0480
15-cis-phytoene desaturase, chloroplastic/chromoplastic.
    
 
 0.801
F751_1881
NnrU domain-containing protein.
      
 0.798
F751_6907
Cytochrome P450 97B3, chloroplastic; Belongs to the cytochrome P450 family.
   
 
 0.797
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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