Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
F751_2695Actin-related protein 2/3 complex subunit 1B. (416 aa)    
Predicted Functional Partners:
F751_5002
Actin-related protein 2; Belongs to the actin family.
   
 0.999
F751_3076
Actin-related protein 3; Belongs to the actin family.
   
 0.999
F751_3494
Actin-related protein 2/3 complex subunit 4.
  
 0.996
F751_3445
Uncharacterized protein.
   
 0.960
F751_5478
Pectate_lyase_3 domain-containing protein.
    
 0.873
F751_4266
Alpha-1,4-glucan-protein synthase [UDP-forming] 1.
   
 0.827
F751_3554
Actin.
   
 0.827
F751_4066
Actin-related protein 6; Belongs to the actin family.
   
 0.827
F751_1592
Actin-related protein 7; Belongs to the actin family.
   
 0.827
F751_0324
Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.
   
 
 0.751
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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