Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
F751_2696Uncharacterized protein C4G9.04c. (465 aa)    
Predicted Functional Partners:
F751_5584
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.995
F751_3781
Polyribonucleotide 5'-hydroxyl-kinase Clp1.
   
 0.995
F751_1088
Protein MPE1.
   
 0.994
F751_5132
Symplekin.
    
 0.994
F751_5457
Cleavage and polyadenylation specificity factor CPSF30.
   
 0.992
F751_0505
mRNA 3'-end-processing protein rna-14.
    
 0.991
F751_4562
Poly(A) polymerase.
    
 0.990
F751_6275
Cleavage and polyadenylation specificity factor subunit 5.
    
 0.988
F751_1193
Uncharacterized protein.
    
 0.966
F751_2947
Flowering time control protein FY.
   
 0.957
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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