Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
F751_2698Carboxyl-terminal-processing protease. (912 aa)    
Predicted Functional Partners:
F751_3275
Luminal-binding protein 5; Belongs to the heat shock protein 70 family.
   
 0.777
F751_4648
Hypoxia up-regulated protein 1.
   
 0.739
F751_3303
Uncharacterized protein.
    
 0.693
F751_5642
Histone acetyltransferase GCN5.
    
  0.676
F751_2321
Ubiquitin-40S ribosomal protein S27a-1.
   
 0.638
F751_5889
60S ribosomal protein L31.
   
 
 0.618
F751_3036
60S ribosomal protein L13a-1; Belongs to the universal ribosomal protein uL13 family.
   
   0.608
F751_2616
Heat shock cognate 70 kDa protein.
   
 0.608
F751_4448
Chaperone protein dnaK.
   
 0.608
F751_1629
Chaperone protein dnaK1.
   
 0.608
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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