Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
F751_2090Uncharacterized protein. (117 aa)    
Predicted Functional Partners:
F751_1491
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
      
 0.675
F751_6732
Chloride channel protein CLC-f.
   
 
 0.620
F751_4837
Eukaryotic translation initiation factor 3 subunit A.
      
 0.594
F751_4639
Carbonic anhydrase 2.
   
 
 0.581
F751_1249
Uncharacterized protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.575
F751_6548
Aquaporin-1; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 
 0.568
F751_5395
Chloride channel protein.
   
  
 0.555
F751_2164
RuvB-like helicase; Belongs to the RuvB family.
      
 0.503
F751_0221
Protein FAM91A1.
     
  0.490
F751_2091
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
 
      0.479
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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