STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F751_6658Uncharacterized protein. (635 aa)    
Predicted Functional Partners:
F751_6615
Glutamate synthase [NADH], amyloplastic.
  
 
 0.653
F751_5489
Ferredoxin-dependent glutamate synthase, chloroplastic.
  
 
 0.653
F751_4598
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
   
 0.646
F751_4834
Delta-1-pyrroline-5-carboxylate synthase B.
     
 0.589
F751_4835
Delta-1-pyrroline-5-carboxylate synthase.
     
 0.589
F751_1234
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
  
  
 0.576
F751_5781
Isocitrate lyase.
   
  
 0.567
F751_5995
NADPH:adrenodoxin oxidoreductase, mitochondrial.
  
 
 0.494
F751_3582
NAD-dependent deacetylase sir2D.
    
 0.492
F751_3714
5-oxoprolinase.
    
 0.492
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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