STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F751_6691Mannan endo-1,4-beta-mannosidase 1; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (436 aa)    
Predicted Functional Partners:
F751_3201
Phosphotransferase.
    
 0.912
F751_6249
Chromatin structure-remodeling complex subunit snf21.
    
 0.856
F751_4917
Uncharacterized protein.
    
 0.585
F751_2304
Leucine-rich repeat-containing protein 1.
    
 0.562
F751_4213
40S ribosomal protein S14-3; Belongs to the universal ribosomal protein uS11 family.
   
  0.556
F751_0753
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
  0.543
F751_1779
37S ribosomal protein MRP17, mitochondrial.
    
  0.517
F751_6731
30S ribosomal protein S16.
   
  0.509
F751_2559
Putative mannan endo-1,4-beta-mannosidase 4.
  
     0.499
F751_0864
SUMO-conjugating enzyme SCE1; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.494
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.