STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F751_6691Mannan endo-1,4-beta-mannosidase 1; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (436 aa)    
Predicted Functional Partners:
F751_6249
Chromatin structure-remodeling complex subunit snf21.
    
 0.942
F751_3201
Phosphotransferase.
    
  0.909
F751_4269
Histone H2A deubiquitinase MYSM1.
    
 0.787
F751_1346
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
    
 0.785
F751_4917
Uncharacterized protein.
    
 0.675
F751_2304
Leucine-rich repeat-containing protein 1.
    
 0.647
F751_4484
Ankyrin repeat, PH and SEC7 domain containing protein secG.
   
 0.617
F751_1779
37S ribosomal protein MRP17, mitochondrial.
    
  0.578
F751_4416
40S ribosomal protein S5-2; Belongs to the universal ribosomal protein uS7 family.
    
 0.527
F751_6087
General transcription factor 3C polypeptide 5.
    
 0.523
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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