STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F751_6696Vesicle-associated protein 1-2. (232 aa)    
Predicted Functional Partners:
F751_3180
Oxysterol-binding protein 9.
    
 
 0.962
F751_1202
Putative syntaxin-131; Belongs to the syntaxin family.
    
 0.864
F751_2046
Syntaxin-32.
    
 0.808
F751_3381
Oxysterol-binding protein-related protein 3B; Belongs to the OSBP family.
    
 
 0.764
F751_3383
Oxysterol-binding protein-related protein 1C.
    
 
 0.764
F751_3207
Oxysterol-binding protein 9; Belongs to the OSBP family.
   
 
 0.747
F751_6165
Uncharacterized protein.
   
 
 0.747
F751_2985
Phosphatidylinositide phosphatase SAC1.
    
 
 0.737
F751_2986
Phosphatidylinositide phosphatase SAC1.
    
 
 0.737
F751_1108
Membrane-associated phosphatidylinositol transfer protein 1.
    
 
 0.698
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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