STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F751_6982TBC1 domain family member 2A. (677 aa)    
Predicted Functional Partners:
F751_6593
Ras-related protein Rab7.
    
 0.609
F751_2214
Dual specificity protein phosphatase CDC14A.
    
 
 0.600
F751_2304
Leucine-rich repeat-containing protein 1.
    
 
 0.524
F751_4484
Ankyrin repeat, PH and SEC7 domain containing protein secG.
    
   0.501
F751_3996
DDI1-like protein 2.
    
 
 0.493
F751_3548
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
   0.493
F751_6930
Mitochondrial Rho GTPase.
   
 0.475
F751_5630
PAP-associated domain-containing protein 5.
      
 0.459
F751_0218
Nuclear control of ATPase protein 2.
    
 0.441
F751_4704
Uncharacterized protein.
    
 0.441
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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