Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
F751_0314Thioredoxin domain-containing protein 9-like protein. (216 aa)    
Predicted Functional Partners:
F751_5967
T-complex protein 1 subunit epsilon.
   
  0.764
F751_3325
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
  0.752
F751_3883
T-complex protein 1 subunit gamma.
   
  0.704
F751_6269
T-complex protein 1 subunit beta.
   
  0.700
F751_2474
T-complex protein 1 subunit zeta.
   
 0.654
F751_0795
T-complex protein 1 subunit alpha.
   
 0.617
F751_5546
Peroxisome biogenesis protein 7.
    
   0.608
F751_6576
T-complex protein 1 subunit delta.
   
  0.606
F751_2696
Uncharacterized protein C4G9.04c.
    
   0.572
F751_5250
Viral IAP-associated factor-like protein.
   
 
 0.557
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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